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sam::TrimAndFill

Module: Meta Analysis Methods

Trim and Fill Publication Bias Test. #include <MetaAnalysis.h>

Inherits from sam::MetaAnalysis

Public Classes

Name
struct Parameters
Parameters of the TrimAndFill.
struct ResultType

Public Functions

Name
TrimAndFill() =default
TrimAndFill(const Parameters & p)
virtual void estimate(Journal * journal)
ResultType TF(arma::Row< float > yi, arma::Row< float > vi, arma::Row< float > ni, const Parameters & params)

Public Attributes

Name
Parameters params

Additional inherited members

Public Functions inherited from sam::MetaAnalysis

Name
virtual ~MetaAnalysis() =0
std::unique_ptr< MetaAnalysis > build(std::string name)
std::unique_ptr< MetaAnalysis > build(const json & config)
std::vector< std::string > Columns(std::string name)

Public Functions Documentation

function TrimAndFill

TrimAndFill() =default

function TrimAndFill

inline TrimAndFill(
    const Parameters & p
)

function estimate

virtual void estimate(
    Journal * journal
)

Reimplements: sam::MetaAnalysis::estimate

function TF

static ResultType TF(
    arma::Row< float > yi,
    arma::Row< float > vi,
    arma::Row< float > ni,
    const Parameters & params
)

Determining the side

flip data if examining right side

sort data by increasing yi

centered values;

Todoties_method="first"); // ranked absolute centered values;

signed ranked centered values;

estimate the number of missing studies with the L0 estimator

estimate the number of missing studies with the Q0 estimator

round k0 and make sure that k0 is non-negative

---------------— Filling and estimating -------------—

if estimated number of missing studies is > 0

flip data back if side is right

create filled-in data set

apply limits if specified Todo: to be implemented

fit model with imputed data

Todoneed to be integrated!

Adjustment for p_k0

TodoThis imbue can be improved

TodoStill need to report the p_k0

Public Attributes Documentation

variable params

Parameters params;

Updated on 29 June 2021 at 16:13:47 CEST


Last update: 2021-09-18